CDS

Accession Number TCMCG017C05642
gbkey CDS
Protein Id OMP07585.1
Location complement(join(46303..46440,46707..46778,47292..47835,48107..48258,48375..48395,48499..48623,49360..49407,49600..49721,49803..49831,50038..50082,50347..50534,50732..50888,50974..51057,51147..51240,51675..51783,52278..52370,52463..52535,52605..52692,53315..53385,53469..53542,53617..53678,54544..54667,56088..56481))
GeneID InterPro:IPR006554
Organism Corchorus olitorius
locus_tag COLO4_07212

Protein

Length 968aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215141, BioSample:SAMN03160584
db_source AWUE01013157.1
Definition Helicase-like, DEXD box c2 type [Corchorus olitorius]
Locus_tag COLO4_07212

EGGNOG-MAPPER Annotation

COG_category L
Description Fanconi anemia group J protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K15362        [VIEW IN KEGG]
EC 3.6.4.12        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03440        [VIEW IN KEGG]
ko03460        [VIEW IN KEGG]
map03440        [VIEW IN KEGG]
map03460        [VIEW IN KEGG]
GOs GO:0000018        [VIEW IN EMBL-EBI]
GO:0000166        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004003        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005524        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006282        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008094        [VIEW IN EMBL-EBI]
GO:0008144        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010569        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017076        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030554        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032553        [VIEW IN EMBL-EBI]
GO:0032555        [VIEW IN EMBL-EBI]
GO:0032559        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0035639        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043167        [VIEW IN EMBL-EBI]
GO:0043168        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0080135        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097367        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901265        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:2000779        [VIEW IN EMBL-EBI]
GO:2001020        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGTAGCAGCGGATGGAGCGAACCCCACCGCTAACCCCAACCCTAACATCGCGAACTCCGAGAATCCCAAAAATGTATACCAAATTGCCGGAGTTCCAGTGCAATTCCCCTACAAGCCGTACGGTACGCAGTTCACTTTCATGTACAGAGTGATATCAACCCTGGATCGAGCTCAGAAAGAGGGCCGTTGTCACGCATTGCTTGAATCCCCCACTGGCACCGGCAAATCCCTCTCGCTTCTTTGCTCCACTCTAGCCTGGCAACAGAACAATAAGCTCAAGAATCTCAAGAATCTCCAGGCCCATCTCTCTCACTCTACACCTGCACCGGAGGCCATTACCGATCCCCTTGGTCACGGCGGTGGTTTTATCCCTGAAACTCAACCTTCAACACGCTCAATGGCAGATGGCGCACAATTGGTTTTTTGCCCATATAACTACATCATCAATCCTGTTATTCGAGGAGCAATGGATGTAGATATTAAGGGAGCCGTTATAGTTCTTGATGAAGCTCACAATATTGAGGATATTGCCCGCGACGCTGGTAGTGTAGATCTTGAAGAAGATGCTTTGCTAAAACTGCAGACTGAGCTACAGCAAATCTACCAGTTTGATGCCACAATATACCAACCATTGTACGAAATGACACAGGACTTAATAGCGTGGATTGAGCAGAGAAAAAGCACATTAGAAGAGCGTGAATTTCAGCACTACTTCTCCTCCTGGACTGGTGACAATGCATTAAGACAACTCCAAGAAGCTAACATTTCACAGCAGTGCTTCCCTATCTTGCTAGATTGTGCGACAAAGGCAATCAAAGCTTCTACAGATACAGAATCAGATGAACCTCATTTAAGTGGCATGTCTGTGATAACCTTGGAAGGGCTGTTCTCTTCACTGACATATTTCTTCTCAAGAAATGGTTCTCACATTTTTGATTATCAGCTTGCTCTACGACGATTTAAAAAGGATAGCAAAAATGCTTTCGGAAGCTGGACATGCTGTTTAAGTTTGTGGTGCTTGAATCCAGCAGTTGTTTTCAGAGACATTGCCGATCTTTCATTGTCCGTCATTTTAACATCTGGGACGTTATCACCAATGAATTCTTTCTCATCAGAGCTTGGAGTTCAGTTTGGGAACTGTTTGGAGGCTCCTCATGTTATTGATGTTAAATCCCAGGTCTGGTCTGCTGTAATCTCCCACAGTCCTGGTAATTATGTATTGGATGCTAGTTATAAAACATCTAACACATATGCTTTCCAGGATGCACTTGGCAAATCCTTGGAAGAAATTTGCAAGACTGTTCCTGGTGGCTCGCTGATTTTCTTCCCCAGTTACAAGTTGATGGAGACACTATGCAAGCGATGGAAAGGTACAGGTCAATGGTCACGACTTAATGCAATAAAGCGCCTTTTTGTTGAGCCAAGAGGAGGGAGTCAGGAAGAATTTGAGACTGTTTTGAAAGGTTATTATGATTCAGTATCTCGAGGCAAGAAACCTGCTTTAGGGAGAAAGAGAAGGATTAAAAGAACAGATGACAATGTCATTGAGTCTACAGAAGTTACTAACCGTAAAGGAGCTGCTTTTCTTGGAGTTTTCCGAGGAAAGGTGTCAGAAGGCATAGATTTTTCTGATGATAATGCCAGAGTGGTTATAGCTGTTGGCATTCCCTTTCCAAATATAAATGATATTCAGGTGGCATTAAAGAAGCAATATAATAACACTTACAAGTCATCTAAAAACCTTCTCAGTGGAAGCGAGTGGTACTGCCAACAAGCCTTCAGAGCTTTAAATCAAGCTCTTGGAAGGTGTATACGTCATAAAGATGATTATGGAGCCATCATCCTACTAGATTGGCGATATGAGGAGGAAAGGAATCGAGCATACATTTCAAAGTGGTTAAAGCCAGCCATTAAAAAGTTTGAAAGTTTTGAGAAGTCATTAGAGGAGCTAAGATCCTTTTTCAGAGATGTCAAGGACCTGGTTGGAAAGAATAAGCAACAACTTTCTTTGGCAAAATATGATGCCATTTTCTCCCAAATGAAGGCTCAAAGTGATCTTACAGTTCAAACAAGCGTGCAAGTAGGTACAGACAGGAACACATCCAAGGAATATATTGATCTAGAATGCAGCTCTCCAAAAGAATCCCGGTCTTTTGAGACTTTATCCACGACATTTTCCAATGAAGATCCAGACTTGATCATCGTCAAAGAGACTCCTCCTTTTGGGGGTTCTGGCATCTCCATAGCTAGTCCCAGCTCAGTATCTAAGGATGTGAACTCTAATTCAACTATAATTCATGCATCAACCAAGTCATCAGATCAGTTTTCAATTCATCCAATGTCTTCAACAAGCCTGAATGAAGTTCCTTCCACTTATGAATCTGGGAAAATGTTCACCCCTGAAAAAGATGTCAAACAGAATGCTTCCAGCCTGATACCGAAAATTGAATCTCCGTTGAATCTTAGTGTCTGTTCTTATATCCAAAAAAGGAGGAAATCTGTGGGTTCACCTTTCATTAACCTTGTTATCGAAGAATGCACTGATTCTCCTGCAAAAGTTCCAGTTTCTAGGAGTTTCAAGGAAAACTTACTAGCCAACAGAGACATAACACGCAGAATGGAATTTGATTTCGAGACAGGTTCAGCCGAAAACAACCCCAAAACACCTCAGTCATTGGCCACTGATGGTTCTTTACTGCTTTATGTTGATTGTGTGGAAATTAGAAATTCTGAAGCAGCAGGAGATGAGGCTGCAAAGGATAATGTTAATAGCTCAAGCGTAGACAGAACTGCCGTCTTAAGTTCCATTGATAAGTTTGCATATTCCCCCAAGCAGCCAAACCTAGGAGGATGGAGGACTACAAAATCAAAGGTTACACAAAGAAACCCTTTGAGCTCTTAA
Protein:  
MSVAADGANPTANPNPNIANSENPKNVYQIAGVPVQFPYKPYGTQFTFMYRVISTLDRAQKEGRCHALLESPTGTGKSLSLLCSTLAWQQNNKLKNLKNLQAHLSHSTPAPEAITDPLGHGGGFIPETQPSTRSMADGAQLVFCPYNYIINPVIRGAMDVDIKGAVIVLDEAHNIEDIARDAGSVDLEEDALLKLQTELQQIYQFDATIYQPLYEMTQDLIAWIEQRKSTLEEREFQHYFSSWTGDNALRQLQEANISQQCFPILLDCATKAIKASTDTESDEPHLSGMSVITLEGLFSSLTYFFSRNGSHIFDYQLALRRFKKDSKNAFGSWTCCLSLWCLNPAVVFRDIADLSLSVILTSGTLSPMNSFSSELGVQFGNCLEAPHVIDVKSQVWSAVISHSPGNYVLDASYKTSNTYAFQDALGKSLEEICKTVPGGSLIFFPSYKLMETLCKRWKGTGQWSRLNAIKRLFVEPRGGSQEEFETVLKGYYDSVSRGKKPALGRKRRIKRTDDNVIESTEVTNRKGAAFLGVFRGKVSEGIDFSDDNARVVIAVGIPFPNINDIQVALKKQYNNTYKSSKNLLSGSEWYCQQAFRALNQALGRCIRHKDDYGAIILLDWRYEEERNRAYISKWLKPAIKKFESFEKSLEELRSFFRDVKDLVGKNKQQLSLAKYDAIFSQMKAQSDLTVQTSVQVGTDRNTSKEYIDLECSSPKESRSFETLSTTFSNEDPDLIIVKETPPFGGSGISIASPSSVSKDVNSNSTIIHASTKSSDQFSIHPMSSTSLNEVPSTYESGKMFTPEKDVKQNASSLIPKIESPLNLSVCSYIQKRRKSVGSPFINLVIEECTDSPAKVPVSRSFKENLLANRDITRRMEFDFETGSAENNPKTPQSLATDGSLLLYVDCVEIRNSEAAGDEAAKDNVNSSSVDRTAVLSSIDKFAYSPKQPNLGGWRTTKSKVTQRNPLSS